YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	E13A_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESRSLASP PMLMILLSLV IASFFNHTAG QIGVCYGMLG DTLPSPSDVV ALYKQQNIQR  60
   61 MRLYGPDPGA LAALRGSDIE LILDVPSSDL ERLASSQTEA DKWVQENVQS YRDGVRFRYI 120
  121 NVGNEVKPSV GGFLLQAMQN IENAVSGAGL EVKVSTAIAT DTTTDTSPPS QGRFRDEYKS 180
  181 FLEPVIGFLA SKQSPLLVNL YPYFSYMGDT ANIHLDYALF TAQSTVDNDP GYSYQNLFDA 240
  241 NLDSVYAALE KSGGGSLEIV VSETGWPTEG AVGTSVENAK TYVNNLIQHV KNGSPRRPGK 300
  301 AIETYIFAMF DENKKEPTYE KFWGLFHPDR QSKYEVNFN

Type	Start	End	Confidence
Signal Peptide	1	30	0.93
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	339	0.99