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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CALR1_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKLNPKFIS LILFALVVIV SAEVIFEEKF EDGWEKRWVK SDWKKDDNTA GEWKHTAGNW  60
   61 SGDANDKGIQ TSEDYRFYAI SAEFPEFSNK DKTLVFQFSV KHEQKLDCGG GYMKLLSDDV 120
  121 DQTKFGGDTP YSIMFGPDIC GYSTKKVHAI LTYNGTNHLI KKEVPCETDQ LTHVYTFVLR 180
  181 PDATYSILID NVEKQTGSLY SDWDLLPAKK IKDPSAKKPE DWDDKEYIPD PEDTKPAGYD 240
  241 DIPKEIPDTD AKKPEDWDDE EDGEWTAPTI PNPEYNGEWK PKKIKNPAYK GKWKAPMIDN 300
  301 PEFKDDPELY VFPKLKYVGV ELWQVKSGSL FDNVLVSDDP EYAKKLAEET WGKHKDAEKA 360
  361 AFDEAEKKRE EEESKDAPAE SDAEEEAEDD DNEGDDSDNE SKSEETKEAE ETKEAEETDA 420
  421 AHDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle