YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIERARVPL SRWQQAAVAM GSALGALVDP RRADLIAALG ETTGKPAFEM VLERMKKSEE  60
   61 GRAILLERPR VVSEQVGHAW DLPENTFGAA YAKFMGSRNF SPDDRPPVRF METDELAYVA 120
  121 TRAREVHDLW HTLFGLPTNL IGESSLKVIE FEQMYLPMCM LSVIGGTVRF NEKQRSMFLK 180
  181 HYLPWAVRAG RQCTDLMCVY YERHFSEDLE QVRRKWGIIP APQHPK

Type	Start	End	Confidence
Signal Peptide	1	33	0.76
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	226	0.95