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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNGC9_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDCGKKAVK SQVISGRLEK FVRLDSMDSR YSQTSDTGLN RCTLNLQGPT RGGGAQGNNV  60
   61 SSGSFKKGFR KGSKGLWSIG RSIGLGVSRA VFPEDLKVSE KKIFDPQDKF LLLCNKLFVT 120
  121 SCILAVSVDP LFLYLPFVKD NEKCIGIDRK LAIIATTLRT VIDAFYLFHM ALRFRTAFVA 180
  181 PSSRVFGRGE LVIDPAQIAK RYLQQYFIID FLSVLPLPQI VVWRFLYISK GASVLATKRA 240
  241 LRSIILVQYI PRFIRLYPLS SELKRTAGVF AETAWAGAAY YLLLYMLASH IVGAIWYLLA 300
  301 LERYNGCWTK VCSNSSLDCH RNFLFCGNEK MDGYAAWTTI KDSVLQLNCP VNTTDNPPFD 360
  361 FGIYLRALSS GIVSSKSFVS KYFFCLWWGL QNLSTLGQGL ETSTYPGEVI FSIALAIAGL 420
  421 LLFALLIGNM QTYLQSLTIR LEEMRVKRRD SEQWMHHRML PPELRERVRR YDQYKWLETR 480
  481 GVDEENLVQN LPKDLRRDIK RHLCLALVRR VPLFENMDER LLDAICERLK PCLYTESSYL 540
  541 VREGDPVNEM LFIIRGRLES VTTDGGRSGF FNRSLLKEGD FCGEELLTWA LDPKSGSNLP 600
  601 SSTRTAKALT EVEAFALIAD ELKFVASQFR RLHSRQVQHT FRFYSQQWRT WAAIFIQAAW 660
  661 RRYVKKKKLE QLRKEEEEGE GSVTSIRATF LASKFAANAL RKVHKNRIEA KSTIELVKYQ 720
  721 KPSEPDFSAD DTS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle