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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNGC7_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.30
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKSQYISGQ REKFVRLDDI DSSSSPATGM MMQRNCFGFN LKNRGGEKKK ASKSFREGVK  60
   61 KIRSEGLITI GKSVTRAVFP EDLRITEKKI FDPQDKTLLV WNRLFVISCI LAVSVDPLFF 120
  121 YLPIVDNSGS SCIGIDTKLA VTTTTLRTIV DVFYLTRMAL QFRTAYIAPS SRVFGRGELV 180
  181 IDPAKIAERY LTRYFVVDFL AVLPLPQIAV WKFLHGSKGS DVLPTKTALL NIVIVQYIPR 240
  241 FVRFIPLTSE LKKTAGAFAE GAWAGAAYYL LWYMLASHIT GAFWYMLSVE RNDTCWRFAC 300
  301 KVQPDPRLCV QILYCGTKFV SSGETEWIKT VPELLKSNCS AKADDSKFNY GIYGQAISSG 360
  361 IVSSTTFFSK FCYCLWWGLQ NLSTLGQGLQ TSTFPGEVLF SIAIAIAGLL LFALLIGNMQ 420
  421 TYLQSLTVRL EEMRIKRRDS EQWMHHRSLP QNLRERVRRY DQYKWLETRG VDEENIVQSL 480
  481 PKDLRRDIKR HLCLNLVRRV PLFANMDERL LDAICERLKP SLFTESTYIV REGDPVNEMM 540
  541 FIIRGRLESV TTDGGRSGFF NRGLLKEGDF CGEELLTWAL DPKAGSNLPS STRTVKALTE 600
  601 VEAFALEAEE LKFVASQFRR LHSRQVQQTF RFYSQQWRTW ASCFIQAAWR RYSRRKNAEL 660
  661 RRIEEKEEEL GYEDEYDDES DKRPMVITRS ESSSRLRSTI FASRFAANAL KGHRLRSSES 720
  721 SKTLINLQKP PEPDFDAE

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