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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CKX2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLRLMITL ITVLMITKSS NGIKIDLPKS LNLTLSTDPS IISAASHDFG NITTVTPGGV  60
   61 ICPSSTADIS RLLQYAANGK STFQVAARGQ GHSLNGQASV SGGVIVNMTC ITDVVVSKDK 120
  121 KYADVAAGTL WVDVLKKTAE KGVSPVSWTD YLHITVGGTL SNGGIGGQVF RNGPLVSNVL 180
  181 ELDVITGKGE MLTCSRQLNP ELFYGVLGGL GQFGIITRAR IVLDHAPKRA KWFRMLYSDF 240
  241 TTFTKDQERL ISMANDIGVD YLEGQIFLSN GVVDTSFFPP SDQSKVADLV KQHGIIYVLE 300
  301 VAKYYDDPNL PIISKVIDTL TKTLSYLPGF ISMHDVAYFD FLNRVHVEEN KLRSLGLWEL 360
  361 PHPWLNLYVP KSRILDFHNG VVKDILLKQK SASGLALLYP TNRNKWDNRM SAMIPEIDED 420
  421 VIYIIGLLQS ATPKDLPEVE SVNEKIIRFC KDSGIKIKQY LMHYTSKEDW IEHFGSKWDD 480
  481 FSKRKDLFDP KKLLSPGQDI F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle