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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG19_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHTRTFTSR NRSVSLSNPS FSIDGFDNST VTLGYTGPLR TQRIRPPLVQ MSGPIHSTRR  60
   61 TEPLFSPSPQ ESPDSSSTVD VPPEDDFVFK NANLLRSGQL GMCNDPYCTT CPSYYNRQAA 120
  121 QLHTSRVSAS RFRTVLYGDA RGWAKRFASS VRRCLPGIMN PHSKFVQVWT RVLAFSSLVA 180
  181 IFIDPLFFFL LLIQQDNKCI AIDWRATKVL VSLRSITDLI FFINILLQFR LAYVAPESRI 240
  241 VGAGQLVDHP RKIARHYFRG KFLLDMFIVF PIPQIMILRI IPLHLGTRRE ESEKQILRAT 300
  301 VLFQYIPKLY RLLPLLAGQT STGFIFESAW ANFVINLLTF MLAGHAVGSC WYLSALQRVK 360
  361 KCMLNAWNIS ADERRNLIDC ARGSYASKSQ RDLWRDNASV NACFQENGYT YGIYLKAVNL 420
  421 TNESSFFTRF SYSLYWGFQQ ISTLAGNLSP SYSVGEVFFT MGIIGLGLLL FARLIGNMHN 480
  481 FLQSLDRRRM EMMLRKRDVE QWMSHRRLPE DIRKRVREVE RYTWAATRGV NEELLFENMP 540
  541 DDLQRDIRRH LFKFLKKVRI FSLMDESVLD SIRERLKQRT YIRSSTVLHH RGLVEKMVFI 600
  601 VRGEMESIGE DGSVLPLSEG DVCGEELLTW CLSSINPDGT RIKMPPKGLV SNRNVRCVTN 660
  661 VEAFSLSVAD LEDVTSLFSR FLRSHRVQGA IRYESPYWRL RAAMQIQVAW RYRKRQLQRL 720
  721 NTAHSNSNR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle