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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG14_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFKRDNTVR FYGDEKQTIE VGEKRVPLFK STTAPFMKQE VLPKKSKTRL KIPRFGRFKV  60
   61 FPENFEIERD KILDPGGDAV LQWNRVFLFW CLVALYVDPL FFFLSSVKRI GRSSCMTTDL 120
  121 KLGIVITFFR TLADLFYVLH IVIKFRTAYV SRTSRVFGRG ELVKDPKLIA RRYLRSDFIV 180
  181 DLIACLPLPQ IVSWFILPSI RSSHSDHTTN ALVLIVLVQY IPRLYLIFPL SAEIIKATGV 240
  241 VTTTAWAGAA YNLLQYMLAS HILGSAWYLL SIERQATCWK AECHKESVPL QCVTDFFDCG 300
  301 TLHRDDRNNW QNTTVVFSNC DPSNNIQFTF GIFADALTKN VVSSPFLEKY LYCLWFGLQN 360
  361 LSSYGQNLST STSVLETMFA ILVAIFGLVL FALLIGNMQT YLQSITVRLE EWRLKRRDTE 420
  421 EWMGHRLLPQ NLRERVRRFV QYKWLATRGV DEETILHSLP ADLRRDIQRH LCLDLVRRVP 480
  481 LFAQMDDQLL DAICERLASS LSTQGNYIVR EGDPVTEMLF IIRGKLESST TNGGRTGFFN 540
  541 SITLRPGDFC GEELLAWALL PKSTVNLPSS TRTVRALEEV EAFALQAGDL KFVANQFRRL 600
  601 HSKKLQHTFR YYSHQWRTWA ACFVQVAWRR YKRKKLAKSL SLAESFSSYD EEEAVAVAAT 660
  661 EEMSHEGEAQ SGAKARHHTS NVKPHFAATI LASRFAKNTR RTAHKLKDVE IPMLPKPDEP 720
  721 DFSVDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle