YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C86A1_ARATH
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALNSILTG YAVAALSVYA LWFYFLSRRL TGPKVLPFVG SLPYLIANRS RIHDWIADNL  60
   61 RATGGTYQTC TMVIPFVAKA QGFYTVTCHP KNVEHILKTR FDNYPKGPMW RAAFHDLLGQ 120
  121 GIFNSDGDTW LMQRKTAALE FTTRTLRQAM ARWVNGTIKN RLWLILDRAV QNNKPVDLQD 180
  181 LFLRLTFDNI CGLTFGKDPE TLSLDLPDNP FSVAFDTATE ATLKRLLYTG FLWRIQKAMG 240
  241 IGSEDKLKKS LEVVETYMND AIDARKNSPS DDLLSRFLKK RDVNGNVLPT DVLQRIALNF 300
  301 VLAGRDTSSV ALSWFFWLVM NNREVETKIV NELSMVLKET RGNDQEKWTE EPLEFDEADR 360
  361 LVYLKAALAE TLRLYPSVPQ DFKYVVDDDV LPDGTFVPRG STVTYSIYSI GRMKTIWGED 420
  421 CLEFRPERWL TADGERFETP KDGYKFVAFN AGPRTCLGKD LAYNQMKSVA SAVLLRYRVF 480
  481 PVPGHRVEQK MSLTLFMKNG LRVYLQPRGE VLA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle