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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C84A1_ARATH
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESSISQTLS KLSDPTTSLV IVVSLFIFIS FITRRRRPPY PPGPRGWPII GNMLMMDQLT  60
   61 HRGLANLAKK YGGLCHLRMG FLHMYAVSSP EVARQVLQVQ DSVFSNRPAT IAISYLTYDR 120
  121 ADMAFAHYGP FWRQMRKVCV MKVFSRKRAE SWASVRDEVD KMVRSVSCNV GKPINVGEQI 180
  181 FALTRNITYR AAFGSACEKG QDEFIRILQE FSKLFGAFNV ADFIPYFGWI DPQGINKRLV 240
  241 KARNDLDGFI DDIIDEHMKK KENQNAVDDG DVVDTDMVDD LLAFYSEEAK LVSETADLQN 300
  301 SIKLTRDNIK AIIMDVMFGG TETVASAIEW ALTELLRSPE DLKRVQQELA EVVGLDRRVE 360
  361 ESDIEKLTYL KCTLKETLRM HPPIPLLLHE TAEDTSIDGF FIPKKSRVMI NAFAIGRDPT 420
  421 SWTDPDTFRP SRFLEPGVPD FKGSNFEFIP FGSGRRSCPG MQLGLYALDL AVAHILHCFT 480
  481 WKLPDGMKPS ELDMNDVFGL TAPKATRLFA VPTTRLICAL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle