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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C71BN_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSIFLCFLLL LLLLLVTIIF TRKSQSSKLK LPPGPPKLPI IGNLHYLNGL PHKCLLNLWK  60
   61 IHGPVMQLQL GYVPLVVISS NQAAEEVLKT HDLDCCSRPE TIASKTISYN FKDIGFAPYG 120
  121 EEWRALRKLA VIELFSLKKF NSFRYIREEE NDLLVKKLSE ASEKQSPVNL KKALFTLSAS 180
  181 IVCRLAFGQN LHESEFIDED SMEDLASRSE KIQAKFAFSN FFPGGWILDK ITGQSKSLNE 240
  241 IFADLDGFFN QVLDDHLKPG RKVLETPDVV DVMIDMMNKQ SQDGSFKLTT DHIKGIISDI 300
  301 FLAGVNTSAT TILWAMTELI RNPRVMKKVQ DEVRTVLGEK RDRITEQDLN QLNYFKLVIK 360
  361 ETFRLHPAAP LLLPREAMAK IKIQGYDIPE KTQIMVNVYA IGRDPDLWEN PEEFKPERFV 420
  421 DSSVDYRGLN FELLPFGSGR RICPGMTMGI ATVELGLLNL LYFFDWGLPE GRTVKDIDLE 480
  481 EEGAIIIGKK VSLELVPTRR Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle