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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C71B9_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATIWFLSLL FLCCILLAAF KHKKRRTNQQ QPPSPPGFPI IGNLHQLGEL PHQSLWSLSK  60
   61 TYGPVMLLKL GSVPTVVVSS SETAKQVLKI NDLHCCSRPS LAGAKELSYN YLDIAFSPFD 120
  121 DYWKELRRIC VQELFSAKRV HSIQPIKEEE VRKLIVSATE SASQKSPVNL SEKFLDLTVS 180
  181 VICKAAFSLD FHTSVLNNDG FDKLIHDAFL FLGSFSASNF FPNGGWIIDW LTGLQRRREK 240
  241 SVKDLDVFYQ QMFDLHKQEN KQGVEDFVDL LLKLEKEETV LGYGKLTRNH VKAILMNVLL 300
  301 GAINTSAMTM TWAMAELIRN PRVMKKVQSE IRNQMINKSV ITLDDIDHLP YLKMVIKETW 360
  361 RLHPPVPLLL PREVMSEFEI NGYKIQPKTL LYVNVWAIGR DPDSWKDADM FYPERFMDNN 420
  421 IDAKGQNFEL LPFGSGRRIC PGMYMGTTMV EFGLANMLYQ FDWEVPDGMV VEDIDMEESP 480
  481 GLAVGKKNEL LLVPVKYLGH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle