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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C71B6_ARATH
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFSFPIST ELLPWLLLLL IPPLLIFFLL RSPKNLPPGP PRLPILGNIH QLGSLPHRSL  60
   61 RDLSLKYGPV ITVYLGSVRT VVVHSPETAE EVLKLHDSEC CTRPKLSITK SFFYDGLGLG 120
  121 FTKWGDYYRD VRKLCVLELF SVKRANSFRN IREEELSRLV NSFSDSASSG SSVDLTANLA 180
  181 KFVASFTCRM AFGLSFQGSG MDNETFLELF TEANRVIGKF AAADIFPGFG WILDRISGLD 240
  241 SSRRKSFQDL DTFYQKAIVD HREKKKTEDR EDLIDVLLKL QSQETKLGSS RITDTHIRAI 300
  301 IMDLFVAGVD TSVITLDWTM AELSRHPRVM KKVQAEIREH VGDKGIVTYD DLEALVYMKM 360
  361 VIKETWRLHA PSPILIPREA MTNFKIKGYD IYPGTRIHVN AWAIGRNPDV WKDPDEFIPE 420
  421 RFVDSNVETK GTSFELLPFG SGRRGCPAMY VGLSTVEYTL ANLLYHFDWK ATEEVSVEEA 480
  481 PGLTSHRKHP LHLVPVNVIN RKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle