YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C71AM_ARATH
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESMIRIILL SLIIFITILF FIKQKKGKKS NTPASPPRLP LIGNLHQLGR HPHRSLCSLS  60
   61 NRYGPLMLLR FGLVPVLVVS SADVARDILK TYDRVFASRP RSKIFEKIFY EARDVALAPY 120
  121 GEYWRQMKSV CVLHLLTNKM VRSFRNVRQE EISLMMEKIQ KSSSLQVNLS ELLGSLTNDV 180
  181 ISRVALGRKY SDETDFKELM KRLTKLLGEF CVGTYVPWLA WIDWISGLDG QLKKTGNDLD 240
  241 EFLEKVVQDH EDGDAQRTDF VDVLLRIQRE KSVGFEIDRL SIKAIILDVV VGGTDTSYAL 300
  301 MEWAMTELLH RPECLNRLQE EVRTICKGNS SVSEDDIKDM NYLKAVIKET MRLHPPLPLM 360
  361 VPHESTQDVR LGDYHIPAGT QVMINAWAIG REAATWGPDA EKFRPERHLN SSVDFRGHNF 420
  421 ELIPFGAGRR ICPAISFAVI LIEVTLANLV HRYDWRLPEE YIEDQTNVAE STGMVIHRLF 480
  481 PLYAIVSSTT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle