YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BCB2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNGLSKMA VAAATALLLV LTIVPGAVAV TYTIEWTTGV DYSGWATGKT FRVGDILEFK  60
   61 YGSSHTVDVV DKAGYDGCDA SSSTENHSDG DTKIDLKTVG INYFICSTPG HCRTNGGMKL 120
  121 AVNVVAGSAG PPATPTPPSS TPGTPTTPES PPSGGSPTPT TPTPGAGSTS PPPPPKASGA 180
  181 SKGVMSYVLV GVSMVLGYGL WM

Type	Start	End	Confidence
Signal Peptide	1	29	0.98
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	202	0.93