YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BCB1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGVFKTVTF LVLVFAAVVV FAEDYDVGDD TEWTRPMDPE FYTTWATGKT FRVGDELEFD  60
   61 FAAGRHDVAV VSEAAFENCE KEKPISHMTV PPVKIMLNTT GPQYFICTVG DHCRFGQKLS 120
  121 ITVVAAGATG GATPGAGATP APGSTPSTGG TTPPTAGGTT TPSGSSGTTT PAGNAASSLG 180
  181 GATFLVAFVS AVVALF

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	196	0.92