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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: BAK1_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.89
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRLMIPCF FWLILVLDLV LRVSGNAEGD ALSALKNSLA DPNKVLQSWD ATLVTPCTWF  60
   61 HVTCNSDNSV TRVDLGNANL SGQLVMQLGQ LPNLQYLELY SNNITGTIPE QLGNLTELVS 120
  121 LDLYLNNLSG PIPSTLGRLK KLRFLRLNNN SLSGEIPRSL TAVLTLQVLD LSNNPLTGDI 180
  181 PVNGSFSLFT PISFANTKLT PLPASPPPPI SPTPPSPAGS NRITGAIAGG VAAGAALLFA 240
  241 VPAIALAWWR RKKPQDHFFD VPAEEDPEVH LGQLKRFSLR ELQVASDNFS NKNILGRGGF 300
  301 GKVYKGRLAD GTLVAVKRLK EERTQGGELQ FQTEVEMISM AVHRNLLRLR GFCMTPTERL 360
  361 LVYPYMANGS VASCLRERPE SQPPLDWPKR QRIALGSARG LAYLHDHCDP KIIHRDVKAA 420
  421 NILLDEEFEA VVGDFGLAKL MDYKDTHVTT AVRGTIGHIA PEYLSTGKSS EKTDVFGYGV 480
  481 MLLELITGQR AFDLARLAND DDVMLLDWVK GLLKEKKLEA LVDVDLQGNY KDEEVEQLIQ 540
  541 VALLCTQSSP MERPKMSEVV RMLEGDGLAE RWEEWQKEEM FRQDFNYPTH HPAVSGWIIG 600
  601 DSTSQIENEY PSGPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle