YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508755
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VIVTAHAFVM IFFMVMPMMI GGFGNWLVPL MIGAPDMAFP RMNNMSFWLL PPSFLLLLAS  60
   61 SMVEAGAGTG WTVYPPLAGN LAHAGASVDL TIFSLHLAGV SSILGAINFI TTIINMKPPA 120
  121 MTQYQTPLFV WSVLITAVLL LLSLPVLAAG ITMLLTDRNL NTTFFDPAGG GDPILYQHLF 180
  181

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.75
Transmembrane Helix	7	28	0.91
Cytoplasmic	29	46	0.68
Transmembrane Helix	47	71	0.85
Non-Cytoplasmic	72	91	0.73
Transmembrane Helix	92	114	0.90
Cytoplasmic	115	127	0.75
Transmembrane Helix	128	152	0.89
Non-Cytoplasmic	153	180	0.77