YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508745
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDDQIYNVIV TAHAFVMIFF MVMPMMIGGF GNWLVPLMIG APDMAFPRMN NMSFWLLPPS  60
   61 FLLLLASSMV EAGAGTGWTV YPPLAGNLAH AGASVDLTIF SLHLAGVSSI LGAINFITTI 120
  121 INMKPPAMTQ YQTPLFVWSV LITAVLLLLS LPVLAAGITM LLTDRNLNTT

Type	Start	End	Confidence
Non-Cytoplasmic	1	13	0.77
Transmembrane Helix	14	35	0.91
Cytoplasmic	36	53	0.76
Transmembrane Helix	54	78	0.85
Non-Cytoplasmic	79	98	0.79
Transmembrane Helix	99	121	0.90
Cytoplasmic	122	134	0.80
Transmembrane Helix	135	158	0.91
Non-Cytoplasmic	159	170	0.77