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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACA11_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLLKDFEV ASKNPSLEAR QRWRSSVGLV KNRARRFRMI SNLDKLAENE KKRCQIQEKI  60
   61 RVVFYVQKAA FQFIDAGARP EYKLTDEVKK AGFYVEADEL ASMVRNHDTK SLTKIGGPEG 120
  121 IAQKVSVSLA EGVRSSELHI REKIYGENRY TEKPARSFLT FVWEALQDIT LIILMVCAVV 180
  181 SIGVGVATEG FPKGMYDGTG ILLSIILVVM VTAISDYKQS LQFRDLDREK KKIIIQVTRD 240
  241 GSRQEVSIHD LVVGDVVHLS IGDQVPADGI FISGYNLEID ESSLSGESEP SHVNKEKPFL 300
  301 LSGTKVQNGS AKMLVTTVGM RTEWGKLMDT LSEGGEDETP LQVKLNGVAT IIGKIGLGFA 360
  361 VLTFVVLCIR FVVEKATAGS ITEWSSEDAL TLLDYFAIAV TIIVVAVPEG LPLAVTLSLA 420
  421 FAMKQLMSDR ALVRHLAACE TMGSSTCICT DKTGTLTTNH MVVNKVWICE NIKERQEENF 480
  481 QLNLSEQVKN ILIQAIFQNT GSEVVKDKEG KTQILGSPTE RAILEFGLLL GGDVDTQRRE 540
  541 HKILKIEPFN SDKKKMSVLT SHSGGKVRAF CKGASEIVLK MCEKVVDSNG ESVPLSEEKI 600
  601 ASISDVIEGF ASEALRTLCL VYTDLDEAPR GDLPNGGYTL VAVVGIKDPV RPGVREAVQT 660
  661 CQAAGITVRM VTGDNISTAK AIAKECGILT AGGVAIEGSD FRNLPPHEMR AILPKIQVMA 720
  721 RSLPLDKHTL VNNLRKMGEV VAVTGDGTND APALHEADIG LAMGIAGTEV AKENADVIIM 780
  781 DDNFATIVNV AKWGRAVYIN IQKFVQFQLT VNVVALIINF VSACITGSAP LTAVQLLWVN 840
  841 MIMDTLGALA LATEPPNEGL MKRQPIGRTA SFITRAMWRN IIGQSIYQLI VLGILNFAGK 900
  901 QILNLNGPDS TIVLNTIIFN SFVFCQVFNE VNSREIEKIN VFEGMFKSWV FVAVMTATVG 960
  961 FQVIIVEFLG AFASTVPLSW QHWLLCILIG SVSMILAVGL KCIPVESNRH HDGYELLPSG1020
 1021 PSDSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle