YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508673
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SILIRAELGQ PGALLGDDQI YNVIVTAHAF VMIFFMVMPM MIGGFGNWLV PLMIGAPDMA  60
   61 FPRMNNMSFW LLPPSFLLLL ASSMVEAGAG TGWTVYPPLA GNLAHAGASV DLTIFSLHLA 120
  121 GVSSILGAIN FITTIINMKP PAMTQYQTPL FVWSVLITAV LLLLSLPVLA AGITMLLTDR 180
  181 NLNTTFFDPA GGGDPILYQH LF

Type	Start	End	Confidence
Non-Cytoplasmic	1	23	0.74
Transmembrane Helix	24	50	0.82
Cytoplasmic	51	68	0.68
Transmembrane Helix	69	93	0.85
Non-Cytoplasmic	94	113	0.74
Transmembrane Helix	114	136	0.90
Cytoplasmic	137	149	0.76
Transmembrane Helix	150	174	0.89
Non-Cytoplasmic	175	202	0.78