YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148508707
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIRAELGQPG ALLGDDQIYN VIVTAHAFVM IFFMVMPMMI GGFGNWLVPL MIGAPDMAFP  60
   61 RMNNMSFWLL PPSFLLLLAS SMVEAGAGTG WTVYPPLAGN LAHAGASVDL TIFSLHLAGV 120
  121 SSILGAINFI TTIINMKPPA MTQYQTPLFV WSVLITAVLL LLSLPVLAAG ITMLLTDRNL 180
  181 NTTFFDPAGG GDPILYQH

Type	Start	End	Confidence
Non-Cytoplasmic	1	21	0.77
Transmembrane Helix	22	48	0.82
Cytoplasmic	49	66	0.70
Transmembrane Helix	67	91	0.85
Non-Cytoplasmic	92	111	0.75
Transmembrane Helix	112	134	0.90
Cytoplasmic	135	147	0.77
Transmembrane Helix	148	172	0.89
Non-Cytoplasmic	173	198	0.79