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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACA1_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESYLNENFG DVKPKNSSDE ALQRWRKLCW IVKNPKRRFR FTANLSKRSE AEAIRRSNQE  60
   61 KFRVAVLVSQ AALQFINSLK LSSEYTLPEE VRKAGFEICP DELGSIVEGH DLKKLKIHGG 120
  121 TEGLTEKLST SIASGISTSE DLLSVRKEIY GINQFTESPS RGFWLFVWEA LQDTTLMILA 180
  181 ACAFVSLIVG ILMEGWPIGA HDGLGIVASI LLVVFVTATS DYRQSLQFKD LDAEKKKIVV 240
  241 QVTRDKLRQK ISIYDLLPGD VVHLGIGDQI PADGLFISGF SVLINESSLT GESEPVSVSV 300
  301 EHPFLLSGTK VQDGSCKMLV TTVGMRTQWG KLMATLSEGG DDETPLQVKL NGVATIIGKI 360
  361 GLFFAVITFA VLVQGLANQK RLDNSHWIWT ADELMAMLEY FAVAVTIVVV AVPEGLPLAV 420
  421 TLSLAFAMKK MMNDKALVRN LAACETMGSA TTICSDKTGT LTTNHMTVVK ACICEQAKEV 480
  481 NGPDAAMKFA SGIPESAVKL LLQSIFTNTG GEIVVGKGNK TEILGTPTET ALLEFGLSLG 540
  541 GDFQEVRQAS NVVKVEPFNS TKKRMGVVIE LPERHFRAHC KGASEIVLDS CDKYINKDGE 600
  601 VVPLDEKSTS HLKNIIEEFA SEALRTLCLA YFEIGDEFSL EAPIPSGGYT CIGIVGIKDP 660
  661 VRPGVKESVA ICKSAGITVR MVTGDNLTTA KAIARECGIL TDDGIAIEGP EFREKSDEEL 720
  721 LKLIPKLQVM ARSSPMDKHT LVRLLRTMFQ EVVAVTGDGT NDAPALHEAD IGLAMGISGT 780
  781 EVAKESADVI ILDDNFSTIV TVAKWGRSVY INIQKFVQFQ LTVNVVALIV NFLSACLTGN 840
  841 APLTAVQLLW VNMIMDTLGA LALATEPPQD DLMKRSPVGR KGNFISNVMW RNILGQSLYQ 900
  901 LVIIWCLQTK GKTMFGLDGP DSDLTLNTLI FNIFVFCQVF NEISSREMEK IDVFKGILKN 960
  961 YVFVAVLTCT VVFQVIIIEL LGTFADTTPL NLGQWLVSII LGFLGMPVAA ALKMIPVGSH1020
 1021 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle