YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221316249
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKKKQIKL GVFLAGTGHH VASWRHPDAP SDASMNLDYF KELAKTAERG KLDMLFLADS  60
   61 LSIDSKSHPN VLTRFEPFTL LSALAQVTSK IGLTATASTT YSEPFHIARQ FASLDHLSNG 120
  121 RAGWNVVTSS IESTALNFSG EKHLEHHLRY QRAEEFVEIV KGLWDSWEED AFIRNKETGE 180
  181 FFDKEKMHEL NHKGEYFSVR GPLNVSRTPQ GQPVIIQAGS SGDGKALAAK TAEVIFTAQN 240
  241 HLESAQEFYQ SIKEQAAEFG RDPEKIAIMP GIFPIIADTE EAAQAKYKEL QDLIIPSVGL 300
  301 QILQNYLGGI DLSAYPLDGP LPKLDAEASN AVKSRFKLVQ EMAERDNMTI RELYKYVAGS 360
  361 RGHHIFVGTP EQLADKMQEW VDTKACDGFN IMPPLLPEGI EVFVDQVVPI LQERGVFRKE 420
  421 YEGTTLREHF GLEKPVNRYA K

Type	Start	End	Confidence
Signal Peptide	1	23	0.92
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	441	0.99