YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148372343
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPLRVERAP GGSQLAVSTS PESLNQSHPT EDSLLSKGKM EDYETNVLPC WYYYKTSMDS  60
   61 VKDWCNWTLI SRYYSNLRYC LEYEADKFGL GFPNPLAESI ILEAHLIHFA NCSLVQPTFS 120
  121 DPPEDVLLAM IIAPICLIPF LVTLVVWRSK DGDAQA

Type	Start	End	Confidence
Non-Cytoplasmic	1	125	0.62
Transmembrane Helix	126	147	0.91
Cytoplasmic	148	156	0.77