YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221320440
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKAWFLPL VCVLLISGWL APAASASAQT TLSLNDRLAS SPSGTGSLLS LAAPAAPYAD  60
   61 TDTYYEGAEG KTGDSLKSTL HRIISGHTML SYSEVWNALK ETDEDPRNPN NVILLYTNES 120
  121 RSKNLNGGNV GDWNREHVWA KSHGDFGTSK GPGTDIHHLR PADVQVNSAR GNMDFDNGGT 180
  181 EYAKAPGNYY DGDSWEPRDD VKGDVARMLF YMAVRYEGDD GYPDLELNDK TGNGSAPYHG 240
  241 KQSVLLEWNK QDPVDDRERK RNEIIYEKYQ HNRNPFIDHP EWADEIWP

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	288	0.99