YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE40901
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTDNLSDL ASARDYWRTD KYISFVITFQ FYLLLDTMSD SFNWPAGNNE ARERLGEKFE  60
   61 SLHLDSRIST SHAKPLSNAD PVVVPIYHSS TYRFKTVDQF NEDNHGANFV YRRCGNPTTE 120
  121 NVEVVINEIE GGAGSLLYNS GLAAISAVFL EFLSSGAHMI VMNPIYSDSY MS

Type	Start	End	Confidence
Cytoplasmic	1	135	0.59
Transmembrane Helix	136	161	0.67
Non-Cytoplasmic	162	172	0.68