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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE40940
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQPSRRRRP PREVERPSAT IRYEPVAEPE PWCSFCSWDL ILILLVMLGA GCFILLHLYL  60
   61 YPNLEKVAPL PNIDPENAPY TWGTYRPHMY FGLRTRSPMS PLFGMMWYEQ PNTIQRPHIR 120
  121 HWCNQDDRLP GYYWYEADGR HFGKQNISEA HKGVIQTDWI NDANGFAARV KLNMAPGRRY 180
  181 NVILYLSAQE IGTRFRLGKH LSDVFHGYNE LLGKFTMSLR LKDNTKLQTS HSVMLTDEKI 240
  241 PIDRYHDFVV DNTQAYNAPN QPLNYILNEK HNDEEGKFIA VQLNLGSQAE FDIILHSFRT 300
  301 EKLKGMKPEE FTNILRIRSY NFNKKYENVF QLAGKNYTKT QLKMAKVSLS NMLGSVGYWY 360
  361 GHNRVLFNGI VQPYGPHVLF SAVPSRPFFP RGFLWDEGFH QMLIRKMDSK MTLEAIASWM 420
  421 NAMDTSGWIP REMIVGSEAE AKVPAEFIPQ KNDVANPPTL FYVMDKLVND EKTVGRYAGI 480
  481 LKLLYPRLEK WFHWIRITQS GPTRTTYRWR GRNETIKTEL NPKTLSSGLD DFPRASHPSD 540
  541 LEYHLDLRCW LALASRVLNR LAKSYGTDAD YQRTAKAMEE LNNFDSLVKD HWSEEAQGFF 600
  601 DYGKHSFDVA LSPVPTPGSP RQFEYQRVTS RAPSYTLVSD AFGYNNLFPM MLKLIPSKSP 660
  661 ILKSMLDKIR DPKILWTNYG LRSISRSSPY YMARNTEHDP PYWRGYIWIN VNYMVLSSLR 720
  721 HYADQPGPYR ENAENIFSEL RANLVKNLAT QFQKTGFLWE NYDDRTGEGR GCHPFTGWSS 780
  781 LILLIMSDNL DT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle