YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221313872
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKKFVPFAV FLFLFFVSFE MMENPHALDY IGAMKKDTVT VTASKDPLYE ELLQKAPEYE  60
   61 VKPQNARIDK VWKSIPGYNG LKVNIEQSYK KMKQHGKFRE KDLVYSQVKP SVHLESLQPE 120
  121 PIYKGNPDKP MVAFLINVAW GNEYLEKMLP ILQKHQVKAT FFLEGNWVRN NVQLAKKIAK 180
  181 DGHEIGNHSY NHPDMSKLTT GRISEQLDKT NEQIEQTIGV KPKWFAPPSG SFRKAVIDIA 240
  241 AEKQMGTVMW TVDTIDWQKP APSVLQTRVL SKIHNGAMIL MHPTDPTAES LEALITQIKD 300
  301 KGYALGTVTE LMDETRLLK

Type	Start	End	Confidence
Signal Peptide	1	19	0.94
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	319	0.99