YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221313405
Protein type:	Globular with Signal Peptide
Type Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKHIVILGA GYGGVLSALT VRKHYTKEQA RVTVVNKYPT HQIITELHRL AAGNVSEKAV  60
   61 AMPLEKLFKG KDIDLKIAEV SSFSVDKKEV ALADGSTLTY DALVVGLGSV TAYFGIPGLE 120
  121 ENSMVLKSAA DANKVFQHVE DRVREYSKTK NEADATILIG GGGLTGVELV GELADIMPNL 180
  181 AKKYGVDHKE IKLKLVEAGP KILPVLPDDL IERATASLEK RGVEFLTGLP VTNVEGNVID 240
  241 LKDGSKVVAN TFVWTGGVQG NPLVGESGLE VNRGRATVND FLQSTSHEDV FVAGDSAVYF 300
  301 GPDGRPYPPT AQIAWQMGEL IGYNLFAYLE GKTLETFKPV NSGTLASLGR KDAVAIIGAN 360
  361 STPLKGLPAS LMKEASNVRY LTHIKGLFSL AY

Type	Start	End	Confidence
Signal Peptide	1	17	0.79
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	392	0.99