YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221323757
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNIIWVSLT VIGLVFAMCN GTLQDVNEAV FKGAKEAITI SFGLMSVLVF WLGLMKIAEQ  60
   61 SGLLDIFSRM CRPFISKLFP DIPPDHPAMG YILSNLMANF FGLGNAATPL GIKAMEQMKK 120
  121 LNGNRSEASR SMITFLAVNT SCITLIPTTV IAVRMAYSSK TPTDIVGPSI LATLISGIGA 180
  181 IIIDRYFYYR RKKKGR

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.77
Transmembrane Helix	5	24	0.82
Cytoplasmic	25	36	0.84
Transmembrane Helix	37	58	0.89
Non-Cytoplasmic	59	88	0.96
Transmembrane Helix	89	112	0.88
Cytoplasmic	113	131	0.94
Transmembrane Helix	132	153	0.93
Non-Cytoplasmic	154	164	0.83
Transmembrane Helix	165	188	0.89
Cytoplasmic	189	196	0.96