YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221323732
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSKGSIMAC LILFSFTITT FINTETISAF SNQVIQRGAT GDDVVELQAR LQYNGYYNGK  60
   61 IDGVYGWGTY WAVRNFQDQF GLKEVDGLVG AKTKQTLICK SKYYREYVME QLNKGNTFTH 120
  121 YGKIPLKYQT KPSKAATQKA RQQAEARQKQ PAEKTTQKPK ANANKQQNNT PAKARKQDAV 180
  181 AANMPGGFSN NDIRLLAQAV YGEARGEPYE GQVAIAAVIL NRLNSPLFPN SVAGVIFEPL 240
  241 AFTAVADGQI YMQPNETARE AVLDAINGWD PSEEALYYFN PDTATSPWIW GRPQIKRIGK 300
  301 HIFCE

Type	Start	End	Confidence
Signal Peptide	1	24	0.88
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	305	0.99