YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	LEPW_BACSU
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLISNILYV IIFTLIIVLT LVVISTRSSG GEPAVFGYTL KSVLSGSMEP EFNTGSLILV  60
   61 KEITDVKELQ KGDVITFMQD ANTAVTHRIV DITKQGDHLL FKTKGDNNAA ADSAPVSDEN 120
  121 VRAQYTGFQL PYAGYMLHFA SQPIGTAVLL IVPGVMLLVY AFVTISSAIR EIERKTKALE 180
  181 TDTKDSTMST

Type	Start	End	Confidence
Cytoplasmic	1	6	0.88
Transmembrane Helix	7	28	0.87
Non-Cytoplasmic	29	143	0.96
Transmembrane Helix	144	165	0.92
Cytoplasmic	166	190	0.93