YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221322833
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEKNTNTE KTAKKKTNTY LEWGKAIVIA VLLALLIRHF LFEPYLVEGS SMYPTLHDGE  60
   61 RLFVNKTVNY IGELKRGDIV IINGETSKIH YVKRLIGKPG ETVQMKDDTL YINGKKVAEP 120
  121 YLSKNKKEAE KLGVSLTGDF GPVKVPKGKY FVMGDNRLNS MDSRNGLGLI AEDRIVGTSK 180
  181 FVFFPFNEMR QTK

Type	Start	End	Confidence
Cytoplasmic	1	20	0.89
Transmembrane Helix	21	42	0.87
Non-Cytoplasmic	43	193	0.97