YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|161612206, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSAVGFALR KLFVYISAVL MVCAAILQMS MLKLLSFISP GRMRKIHMKM GERSTMTQNP  60
   61 KFRYEDWGPA FFSLAFIKTL FFVNWCSLGL EAFEGHAAPD SALITLDRQK TSVHRFLKGN 120
  121 RPLVLSFGSC TUPPFLYKLD EFKQLVKDFS NVADFLIVYL AEAHATDAWA FKNNVDISVH 180
  181 KNLEERLAAA RTLLKEDPPC PVVVDEMNNI TASKYGALPE RLYVIQSGKV IYQGGIGPWG 240
  241 YKPEEVRKVL EKSK

Type	Start	End	Confidence
Cytoplasmic	1	11	0.66
Transmembrane Helix	12	32	0.90
Non-Cytoplasmic	33	254	0.55