YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221324636
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIETAKVVVA VFILLGALIC LIASFGVLRL PDVFTRAHAA SKGSTLGVNM ILLGVFFYLW  60
   61 FVTGELSAKI LLGILFIFIT SPIGGHLICR AAYNSGVKLD ERSVQDDYNG IRNFVIKRKE 120
  121 DSYL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.70
Transmembrane Helix	7	28	0.94
Cytoplasmic	29	42	0.58
Transmembrane Helix	43	62	0.92
Non-Cytoplasmic	63	69	0.58
Transmembrane Helix	70	89	0.94
Cytoplasmic	90	124	0.73