YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221318482
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARKKKKKHE DEHVDESWLV PYADILTLLL ALFIVLYASS SIDAAKFQML SKSFNEVFTG  60
   61 GTGVLDYSSV TPPENESDGI DEVKKEKEEK EKNKKEKEKA ADQEELENVK SQVEKFIKDK 120
  121 KLEHQLETKM TSEGLLITIK DSIFFDSGKA TIRKEDVPLA KEISNLLVIN PPRNIIISGH 180
  181 TDNMPIKNSE FQSNWHLSVM RAVNFMGLLI ENPKLDAKVF SAKGYGEYKP VASNKTAEGR 240
  241 SKNRRVEVLI LPRGAAETNE K

Type	Start	End	Confidence
Cytoplasmic	1	17	0.88
Transmembrane Helix	18	39	0.87
Non-Cytoplasmic	40	261	0.93