YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221312290
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRGLVRFF FSILAVGALI TSIVGFALKW GEYRGLFLTF EAGQIFSVLF WFIGVGMIFS  60
   61 VISQMGFFVF LTVHRFALEI LRSSSLWNLL QLFFILFVAF DLMYVRFLFF GESGESLAGY 120
  121 AWLPVFLLIF GVITAYIKQK QSSKKTFVSS LFLMVVITAL EWFPALRVND EDWLYLMLFP 180
  181 LMACNAFQLL MLPKFAAK

Type	Start	End	Confidence
Cytoplasmic	1	8	0.87
Transmembrane Helix	9	28	0.97
Non-Cytoplasmic	29	47	0.89
Transmembrane Helix	48	71	0.92
Cytoplasmic	72	86	0.82
Transmembrane Helix	87	108	0.89
Non-Cytoplasmic	109	117	0.83
Transmembrane Helix	118	137	0.96
Cytoplasmic	138	145	0.93
Transmembrane Helix	146	166	0.93
Non-Cytoplasmic	167	172	0.93
Transmembrane Helix	173	192	0.94
Cytoplasmic	193	198	0.75