YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221321546
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKNRILALF VLSLGLLSFM VTPVSAASKG NLLSPDRILT VAHRGASGYV PEHTILSYET  60
   61 AQKMKADFIE LDLQMTKDGK LIVMHDEKLD RTTNGMGWVK DHTLADIKKL DAGSWFNEAY 120
  121 PEKAKPQYVG LKVPTLEEVL DRFGKHANYY IETKSPDTYP GMEEKLIASL QKHKLLGKHS 180
  181 KPGQVIIQSF SKESLVKVHQ LQPNLPTVQL LEAKQMASMT DAALEEIKTY AVGAGPDYKA 240
  241 LNQENVRMIR SHGLLLHPYT VNNEADMHRL LDWGVTGVFT NYPDLFHKVK KGY

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	293	0.99