YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221315003
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIFSLALI SLFAVILLAA CGSKGSNGEA SKESKKDTLA AIKDNDKIVF GVKTDTRLFG  60
   61 LKNPSSGEIE GFDIDIAKQI AKDILGDEKK AQFKEVTSKT RIPMLQNGDI DAIVATMTIT 120
  121 EERKKEVDFS DVYFEAGQSL LVKKGSKIKS VENLGKGSKV LAVKGSTSSQ NIREKAPEAS 180
  181 VLEFENYAEA FTALKSGQGD ALTTDNAILY GMADENKNYQ LTGKPFTDEP YGIAVKKGQS 240
  241 ALAKEINASL KKMKSDGRYD EIYKKWIKED PAE

Type	Start	End	Confidence
Signal Peptide	1	25	0.94
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	273	0.99