YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221313300
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKKRVVVTG LGALSPLGND VDTSWNNAIN GVSGIGPITR VDAEEYPAKV AAELKDFNVE  60
   61 DYMDKKEARK MDRFTQYAVV AAKMAVEDAD LNITDEIAPR VGVWVGSGIG GLETLESQFE 120
  121 IFLTKGPRRV SPFFVPMMIP DMATGQISIA LGAKGVNSCT VTACATGTNS IGDAFKVIQR 180
  181 GDADVMVTGG TEAPLTRMSF AGFSANKALS TNPDPKTASR PFDKNRDGFV MGEGAGIIVL 240
  241 EELEHALARG AKIYGEIVGY GSTGDAYHIT APAQDGEGGA RAMQEAIKDA GIAPEEIDYI 300
  301 NAHGTSTYYN DKYETMAIKT VFGEHAHKLA VSSTKSMTGH LLGAAGGIEA IFSILAIKEG 360
  361 VIPPTINIQT PDEECDLDYV PDEARRQELN YVLSNSLGFG GHNATLIFKK YQS

Type	Start	End	Confidence
Signal Peptide	1	19	0.80
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	413	0.97