YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BDBC_BACSU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRIVFLYA SWVVALIAML GSLYFSEIRK FIPCELCWYQ RILMYPLVLI LGIATFQGDT  60
   61 RVKKYVLPMA IIGAFISIMH YLEQKVPGFS GIKPCVSGVP CSGQYINWFG FITIPFLALI 120
  121 AFILIIIFMC LLKGEKSE

Type	Start	End	Confidence
Cytoplasmic	1	6	0.83
Transmembrane Helix	7	26	0.95
Non-Cytoplasmic	27	36	0.84
Transmembrane Helix	37	56	0.90
Cytoplasmic	57	64	0.79
Transmembrane Helix	65	82	0.96
Non-Cytoplasmic	83	108	0.93
Transmembrane Helix	109	132	0.90
Cytoplasmic	133	138	0.94