YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221314475
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLAKRVSAL TPSTTLAITA KAKELKAAGH DVIGLGAGEP DFNTPQHIID AAVRSMNEGH  60
   61 TKYTPSGGLA ELKNSIAEKF KRDQNIEYKP SQIIVCTGAK HALYTLFQVI LDEEDEVIIP 120
  121 TPYWVSYPEQ VKLAGGKPVY VEGLEENHFK ISPEQLKNAI TEKTKAIVIN SPSNPTGVMY 180
  181 TEEELSALGE VCLEHDILIV SDEIYEKLTY GGKKHVSIAQ LSDRLKEQTV IINGVSKSHS 240
  241 MTGWRIGYAA GSEDIIKAMT NLASHSTSNP TSIAQYGAIA AYNGPSEPLE EMREAFEHRL 300
  301 NTIYAKLIEI PGFSCVKPEG AFYLFPNAKE AAQSCGFKDV DEFVKALLEE EKVAIVPGSG 360
  361 FGSPENVRLS YATSLDLLEE AIERIKRFVE KHS

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	393	0.99