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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPCC1742.01
Protein type: Globular with Signal Peptide
Type Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVRRFLSTS ARALLFTAAL LPSLTSGLPS GNVRILQKGM EPEDYLSSAS QNEVPHDISL  60
   61 PKTELADPNF LVDDMPTLLG RDAAVDPSMF TSTFTVKNGN DANYITASPV SNDASMTAIS 120
  121 TFTSGKEASY AIQASPSTFL PDSTTTSGSQ VSNAVEASST FVADTTSTSC NPATVLIVTT 180
  181 SGSTSTSCPP PTTILIVTVP TTTTTTTVGY PGSVTTTLTG TPSNGTVIDT VEVPTTTNYG 240
  241 YTTITTGYTG STTLTTTVPH SGNETGPTTV YVETPYPTTV TTTTTVGYPG SVTTTLTGAP 300
  301 SNGTVIDTVE VPTTTNYGYT TVTTGYTGST TLTTTVPHSG NETGPTTVYV ETPYPTTVTT 360
  361 TTTVGYPGSV TTTLTGAPSN GTVIDTVEVP TTTNYGYTTV TTGYTGSTTL TTTVPHSGNE 420
  421 TGPTTVYVET PYPTTVTTTT TVGYPGSVTT TLTGAPSNGT VIDTVEIPTT TNYGYTTITT 480
  481 GYTGSTTLTT TVPHSGNETG PTTVYVETPY PTTVTTTTTV GYPGSVTTTL TGAPSNGTVI 540
  541 DTVEVPTTTN YGYTTITTGY TGSTTLTTTV PHSGNETGPT TVYVETPYPT TVTTTTTVGY 600
  601 PGSVTTTLTG APSNGTVIDT VEVPTTTNYG YTTVTTGYTG STTLTTTVPH SGNETGPTTV 660
  661 YVETPYPTTV TTTTTVGYSG SVTTTLTGSG SNSIVTETVD VPTTTSVNYG YTTITTGWTG 720
  721 STTLTSIVTH SGSETGPTTV YIETPSVSAT TTTTTIGYSG SLTTTLTGSS GPVVTNTVEI 780
  781 PYGNSSYIIP TTIVTGTVTT VTTGYTGTET STVTVIPTGT TGTTTVVIQT PTTVTATETD 840
  841 IVTVTTGYTG TETSTVTVTP TGTSTGTTTV VIQTPTTVTA TETDIVTVTT GYTGTETSTV 900
  901 TVTPTGTSTG TTTVVIQTPT TVTATETDIV TVTTGYTGTE TSTVTVTPTG TSTGTTTVVI 960
  961 QTPTTVTATE TDIVTVTTGY TGTETSTVTV TPTGTSTGTT TVVIQTPTTV TATETDIVTV1020
 1021 TTGYTGTETS TVTVTPTGTS TGTTTVVIQT PTTVTATETD IVTVTTGYTG TETSTVTVTP1080
 1081 TGTSTGTTTV VIQTPTTVTA TETDIVTVTT GYTGTETSTV TVTPTGTATG TTTVVINTPT1140
 1141 TTGSEVLPTT GATGTAGTET QLTTATEVQP TTGATGTAGT ETQVTTGTET QATTATETQA1200
 1201 TTATEVQTTT GATGTAGTET QATTATEVQP TTGATGTAGT ETQVTTATEV QPTTGATGTA1260
 1261 GTETQVTTGT ETQATTATET QATTATEVQT TTGATGTAGT ETQATTATEV QPTTGATGTA1320
 1321 GTETQVTTAT EVQPTTGATG TAGTETQVTT GTETQATTAT ETQATTATEV QTTTGATGTA1380
 1381 GTETQVTTAT EVQPTTAVTE TSSSGYYTTI VSSTVVSTVV PGSTVYPVTH VTTTTGVSGE1440
 1441 SSAFTYTTSS TQYEPSTVVT TSYYTTSVYT SAPATETVSS TEAPESSTVT SNPIYQGSGT1500
 1501 STWSTVRQWN GSATYNYTYY TTGGFTGGNN TNVTGLYPSS AGANKPIAYL TFVSLFVYIV1560
 1561 TLI

YRC Informatics Platform - Version 3.0
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