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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE36244
Protein type: Transmembrane
Type Confidence: 0.73
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWKFLIASI TVHLVLIYSI FDVYYTSPLV HGIPPQFINS QEAPAKRIFI ISADGLRYDT  60
   61 FNKYPDKSPY LHSIMNERKG IYGLSRSHIP TESRPGHVAI FAGITEDISA VAKGWKKNPV 120
  121 QFDSVFNRSS YSWMWGSPDI VNLFDDLPNA ESFSYSADEE DFASKDASNL DKWVFEHFEN 180
  181 FLETAKTDEA LNDKMREQKS IFFLHLLGID TNGHGNKPMS RQYIDNIKVV DSGIEKVQHL 240
  241 VDAFFGDHKT AWLFTSDHGM TDWGSHGAGS DDEVLTPFVA WGAGVKQGGP KLDLNQIDLA 300
  301 PLISALIGCP IPVNSMGILP VQMMNSKGSS YEFKAIEANF KQLKEQIIFL KNAKSRRLWF 360
  361 RQFEKFGDKA MESLRTTLAQ LGRDRRFSVA TSLFADNAHL MKEAIVFYHR YDRQMLGAAV 420
  421 SCSFVAWIAL VVSFLHNSTS KENLSLLVPH HLFIIPLACS LLFTAYCSLS MTQTIYIILP 480
  481 IYLISILENH SKLTQRIREH VKALSAQPDW LNKVLSVEVF VKPFLGFVGF SITICIFVLT 540
  541 FMDRAFLAAV FVLLMALPQF YSHPIVSYWS KTWLTLCLVL CIFPFLPAVG VSTHIPLCIL 600
  601 SPIITAFLCH RLSRRSCLTR IQRMLELMIY VQSATAFMIA VVNYGFEKFA ATVNCSMDLL 660
  661 DLNPTFCDCS VVAHGSISCG SSNCIRLMLL CEKIVPYSLL SISYESLFML IFLVLLTLFV 720
  721 RFEFGHLSDV ELLQLKVDST KISTGEYVEL RRTVVCVSFV LCPLFGTGNF ASINSFNPST 780
  781 LNLFISVFSP FTMAILLILK LLIPILLVTS AFASIVRFDQ ESIQRLCCFS LIFTDFMSMC 840
  841 FFHQLRDEGS WLDIGMSISQ FIVSMCISLA LLLLLSISSH LMAFEFRKFP GKRNHQEIES 900
  901 ISSRKLSDDE SA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle