YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36137
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQQRQLPYS VILLILGFTF IIYLVSPTTL LNLFYGEFDP YLSADRKVVV YEKMIEALRN  60
   61 MDKYCKDRRF YCKRPETRHV DCRRVLRGDK AYLQSLTGIN RIPLIENPFL NLTCSAIKNR 120
  121 IIPKSSQFKL LMLNGTAFAR IVFADYEFIE KQVQASYHPQ NFFCFAVDAN SSAEFQKRMK 180
  181 ALERCLPNVF VLPVTESYDS KGHNINLAHY NCMKRLEASR GWGYLMLLQN HDVITKSVYE 240
  241 LDRIFDLLAG ANDVFMSKEI PGRRNKHSKW DLKSLRLFRN ESRNSDYELE ISSGFVQASL 300
  301 SRAVVEWLVN EVDVSILLQQ FPEYGADEQF ISTFQSNQDF KMPGHFTNEC FHNDTSVSFI 360
  361 SRFSRWVPIN LERSSNCASG TVRHDICIFG IEDFLAVSKY PTLSFNKMLP AFDFSIIECT 420
  421 AELLHNRTYL GQRDYNLEDD IYKNLVSVQY HENHKKSDYK LNCTSNFKPW NYLDYL

Type	Start	End	Confidence
Cytoplasmic	1	8	0.83
Transmembrane Helix	9	30	0.83
Non-Cytoplasmic	31	476	0.99