YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE36039
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.90
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVIIICSA ILFNFGIGAQ IDTVVLDELL QEIVDSSMSE LRHRLQEAVF ATSFRRKILG  60
   61 NSEKGEKNPK NLENLLLDDY LKPQKLALSL ETYTSQAPPT TTTVIPVKLV TAADVAISAQ 120
  121 QRVFKDDVSN FANFSDKAAE KSIYSIPRVP VYVAVTVIAA CILTFVLLVG TVIYFLTNRW 180
  181 KETRMKMDLG APPGRILDPL SVQGLATCHV NNVFPGSRRS SLYLDQDRTT SSIWAHP

Type	Start	End	Confidence
Signal Peptide	1	19	0.88
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	151	0.98
Transmembrane Helix	152	177	0.92
Cytoplasmic	178	237	0.97