YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	lips-17
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLIFLCFLC FSSVSSDFSP SFNKFLIDNY GKGINDLLAR RDIGPHGSYG GGTHDGSKRT  60
   61 SKQAVILVHG ITNTAGTFQG HRHHLLNAGW SEELVFATTY GDGGKTMAPM VDMKCQYVKQ 120
  121 VRYMIQVVAA FTHRKVDVIG YSLGSPIARK AILGGACVET GENLGPPLTA LIDTYVSVAG 180
  181 ANRGSFLCAL PFPGACNMNN GLSCMSAYIK DINSRPRYEG KYIFSIYGPG DDKVGYRNTC 240
  241 GQLCSQIAGA NGEFERPGNH DDVLIKTAAL QFKLIDTHAG

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	280	0.99