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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE35924
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGVSLEEGK QASSSLLRDT GQPSSSRSKE AISSSSKGCL LLTVLVIFLF VTLSFAIACF  60
   61 LYYQTLPCTS EECVMTASRL LKRVDQSVEP CDNFYQFACG GWINQSVNLK YDSWNTLYET 120
  121 QRTAHDQIVQ AMHKINDGSY PLPTNAGERA AAKMYEQCMD TDTLEQTGLH LWERFVDELG 180
  181 GWMPELKNGA LEQEESFEIE LDEDEKKRRR FEIEDIILSA FNYSVFPLFW AGVEVNYLNS 240
  241 KEHLITIYEQ LPILLAPEKY HYNKELTPEM IYGKMEGPPV TRALQQVGEE LSAVLGFDST 300
  301 DEKVRMMIAN MIYLEYQITM AGSTFYKEKK ERYTVVMLRE LQEIAPAINW HYFLSRLVGE 360
  361 NLSHSEPIAL KTGTQWIPIL SAIVEKLKQS RSGVAVLKNY VKWKTIMFHL AYASPKCRDG 420
  421 LLWMAVSLYS GAASQRKEFC VLRLSGIFPL SLPSILRKID GIDHTEKNVK AVQNIADRIQ 480
  481 EKYEEMVRSS NLFSDRETRE NVIDKVNNMT KFIGFPDAMR SDYEMEKEAV RLHDTLFWSM 540
  541 VLGSSSVYKE RLQRLRLPVD PRSWVDTRPA ISVPAHNYER NLVQIPFDSL RLPYADEHQL 600
  601 DFANYAGIGT IIGHELTHAF DGQGKLHGPT GNLGVWWSTD SIREFKAREQ CFVKQYAGLM 660
  661 DSHDMNAAKE GLYENIADQV GLKVAYEAWK SNGNQNSGRM PGLEKYSQDQ LFFLAYTQGW 720
  721 CALRSKSYKL QPHMEERIRM LGSLQNSPEF ASAWKCSSES FMNPPDKCSI W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle