YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE35880
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKNGHLFLL TNLKIVRKQS ADRSKNRIIF QAFAINFIVI LYYYGMASEI RQLRDNHLDF  60
   61 IQPYVNIRSD LFIAPKYKIL SCGIRKSMSQ LLINIMCLLH NETEFQNQNR SLNDTWMSER 120
  121 VCSHKDPEFH IPQKNVEQYQ NLTKFAFIRD PFDRFISFYL HVCKNDNGCW DCGDNMRCVV 180
  181 RNVYKSLKSY ENDPDEASSS SIDRHAAPIT WNCNFQETFS QYHLIKIGFD YQSRHAAITQ 240
  241 LTDILYTNRV SDTLITKISN ESMTGETLHG THKSVGRVQA EQQVNEDSVV REYLHKIYFF 300
  301 DYLIFNFDTN HLDDEYKQLL TSWKLFK

Type	Start	End	Confidence
Cytoplasmic	1	26	0.95
Transmembrane Helix	27	46	0.92
Non-Cytoplasmic	47	327	0.99